Store annotations in EPUB files

src/calibre/ebooks/oeb/iterator/bookmarks.py

@@ -10,13 +10,14 @@ import os, numbers
 from io import BytesIO
 
 from calibre.utils.zipfile import safe_replace
-from polyglot.builtins import unicode_type
+from polyglot.builtins import unicode_type, as_unicode
 
 BM_FIELD_SEP = u'*|!|?|*'
 BM_LEGACY_ESC = u'esc-text-%&*#%(){}ads19-end-esc'
 
 
 def parse_bookmarks(raw):
+    raw = as_unicode(raw)
     for line in raw.splitlines():
         if '^' in line:
             tokens = line.rpartition('^')

src/calibre/gui2/viewer/annotations.py

@@ -5,13 +5,22 @@
 from __future__ import absolute_import, division, print_function, unicode_literals
 
 from collections import defaultdict
+from io import BytesIO
 from operator import itemgetter
 
-from calibre.utils.iso8601 import parse_iso8601
+from calibre.srv.render_book import (
-from calibre.utils.serialize import json_dumps, json_loads
+    EPUB_FILE_TYPE_MAGIC, parse_annotation, parse_annotations as _parse_annotations
+)
+from calibre.utils.serialize import json_dumps
+from calibre.utils.zipfile import safe_replace
+from polyglot.binary import as_base64_bytes
 from polyglot.builtins import iteritems, itervalues
 
 
+def parse_annotations(raw):
+    return list(_parse_annotations(raw))
+
+
 def merge_annots_with_identical_titles(annots):
     title_groups = defaultdict(list)
     for a in annots:
@@ -28,6 +37,7 @@ def merge_annots_with_identical_titles(annots):
 
 def merge_annotations(annots, annots_map):
     for annot in annots:
+        annot = parse_annotation(annot)
         annots_map[annot.pop('type')].append(annot)
     lr = annots_map['last-read']
     if lr:
@@ -38,14 +48,6 @@ def merge_annotations(annots, annots_map):
             annots_map[annot_type] = list(merge_annots_with_identical_titles(a))
 
 
-def parse_annotations(raw):
-    ans = []
-    for annot in json_loads(raw):
-        annot['timestamp'] = parse_iso8601(annot['timestamp'], assume_utc=True)
-        ans.append(annot)
-    return ans
-
-
 def serialize_annotations(annots_map):
     ans = []
     for atype, annots in iteritems(annots_map):
@@ -55,3 +57,13 @@ def serialize_annotations(annots_map):
             annot['timestamp'] = annot['timestamp'].isoformat()
             ans.append(annot)
     return json_dumps(ans)
+
+
+def save_annots_to_epub(path, serialized_annots):
+    try:
+        zf = open(path, 'r+b')
+    except IOError:
+        return
+    with zf:
+        serialized_annots = EPUB_FILE_TYPE_MAGIC + as_base64_bytes(serialized_annots)
+        safe_replace(zf, 'META-INF/calibre_bookmarks.txt', BytesIO(serialized_annots), add_missing=True)

src/calibre/gui2/viewer/ui.py

@@ -9,15 +9,15 @@ from collections import defaultdict
 from hashlib import sha256
 from threading import Thread
 
-from PyQt5.Qt import QDockWidget, Qt, QTimer, pyqtSignal
+from PyQt5.Qt import QDockWidget, Qt, pyqtSignal
 
 from calibre.constants import config_dir
 from calibre.gui2 import error_dialog
 from calibre.gui2.main_window import MainWindow
 from calibre.gui2.viewer.annotations import (
-    merge_annotations, parse_annotations, serialize_annotations
+    merge_annotations, parse_annotations, save_annots_to_epub, serialize_annotations
 )
-from calibre.gui2.viewer.convert_book import prepare_book
+from calibre.gui2.viewer.convert_book import prepare_book, update_book
 from calibre.gui2.viewer.web_view import WebView, set_book_path
 from calibre.utils.date import utcnow
 from calibre.utils.ipc.simple_worker import WorkerError
@@ -43,8 +43,6 @@ class EbookViewer(MainWindow):
         except EnvironmentError:
             pass
         self.current_book_data = {}
-        self.save_annotations_debounce_timer = t = QTimer(self)
-        t.setInterval(3000), t.timeout.connect(self.save_annotations)
         self.book_prepared.connect(self.load_finished, type=Qt.QueuedConnection)
 
         def create_dock(title, name, area, areas=Qt.LeftDockWidgetArea | Qt.RightDockWidgetArea):
@@ -75,7 +73,6 @@ class EbookViewer(MainWindow):
     def load_ebook(self, pathtoebook, open_at=None):
         # TODO: Implement open_at
         self.web_view.show_preparing_message()
-        if self.save_annotations_debounce_timer.isActive():
         self.save_annotations()
         self.current_book_data = {}
         t = Thread(name='LoadBook', target=self._load_ebook_worker, args=(pathtoebook, open_at))
@@ -131,15 +128,21 @@ class EbookViewer(MainWindow):
             return
         self.current_book_data['annotations_map']['last-read'] = [{
             'pos': cfi, 'pos_type': 'epubcfi', 'timestamp': utcnow()}]
-        self.save_annotations_debounce_timer.start()
 
     def save_annotations(self):
-        self.save_annotations_debounce_timer.stop()
+        if not self.current_book_data:
+            return
         amap = self.current_book_data['annotations_map']
+        annots = as_bytes(serialize_annotations(amap))
         with open(os.path.join(annotations_dir, self.current_book_data['annotations_path_key']), 'wb') as f:
-            f.write(as_bytes(serialize_annotations(amap)))
+            f.write(annots)
+        if self.current_book_data.get('pathtoebook', '').lower().endswith('.epub'):
+            path = self.current_book_data['pathtoebook']
+            if os.access(path, os.W_OK):
+                before_stat = os.stat(path)
+                save_annots_to_epub(path, annots)
+                update_book(path, before_stat, {'calibre-book-annotations.json': annots})
 
     def closeEvent(self, ev):
-        if self.save_annotations_debounce_timer.isActive():
         self.save_annotations()
         return MainWindow.closeEvent(self, ev)

src/calibre/srv/render_book.py

@@ -31,10 +31,13 @@ from calibre.ebooks.oeb.polish.toc import get_landmarks, get_toc
 from calibre.ebooks.oeb.polish.utils import extract, guess_type
 from calibre.srv.metadata import encode_datetime
 from calibre.utils.date import EPOCH
+from calibre.utils.iso8601 import parse_iso8601
 from calibre.utils.logging import default_log
+from calibre.utils.serialize import json_loads
 from calibre.utils.short_uuid import uuid4
 from polyglot.binary import (
-    as_base64_unicode as encode_component, from_base64_unicode as decode_component
+    as_base64_unicode as encode_component, from_base64_bytes,
+    from_base64_unicode as decode_component
 )
 from polyglot.builtins import is_py3, iteritems, map, unicode_type
 from polyglot.urllib import quote, urlparse
@@ -172,16 +175,16 @@ class Container(ContainerBase):
 
     tweak_mode = True
 
-    def __init__(self, path_to_ebook, tdir, log=None, book_hash=None, save_legacy_bookmark_data=False):
+    def __init__(self, path_to_ebook, tdir, log=None, book_hash=None, save_bookmark_data=False):
         log = log or default_log
         book_fmt, opfpath, input_fmt = extract_book(path_to_ebook, tdir, log=log)
         ContainerBase.__init__(self, tdir, opfpath, log)
-        if save_legacy_bookmark_data:
+        if save_bookmark_data:
             bm_file = 'META-INF/calibre_bookmarks.txt'
-            self.legacy_bookmark_data = None
+            self.bookmark_data = None
             if self.exists(bm_file):
                 with self.open(bm_file, 'rb') as f:
-                    self.legacy_bookmark_data = f.read().decode('utf-8')
+                    self.bookmark_data = f.read()
         # We do not add zero byte sized files as the IndexedDB API in the
         # browser has no good way to distinguish between zero byte files and
         # load failures.
@@ -541,9 +544,31 @@ def serialize_datetimes(d):
             d[k] = v
 
 
-def get_legacy_annotations(container):
+EPUB_FILE_TYPE_MAGIC = b'encoding=json+base64:\n'
+
+
+def parse_annotation(annot):
+    ts = annot['timestamp']
+    if hasattr(ts, 'rstrip'):
+        annot['timestamp'] = parse_iso8601(ts, assume_utc=True)
+    return annot
+
+
+def parse_annotations(raw):
+    for annot in json_loads(raw):
+        yield parse_annotation(annot)
+
+
+def get_stored_annotations(container):
     from calibre.ebooks.oeb.iterator.bookmarks import parse_bookmarks
-    raw = container.legacy_bookmark_data or b''
+
+    raw = container.bookmark_data or b''
+    if raw.startswith(EPUB_FILE_TYPE_MAGIC):
+        raw = raw[len(EPUB_FILE_TYPE_MAGIC):]
+        for annot in parse_annotations(from_base64_bytes(raw)):
+            yield annot
+        return
+
     for bm in parse_bookmarks(raw):
         if bm['type'] == 'cfi' and isinstance(bm['pos'], unicode_type):
             spine_index = (1 + bm['spine']) * 2
@@ -556,7 +581,7 @@ def get_legacy_annotations(container):
 
 
 def render(pathtoebook, output_dir, book_hash=None, serialize_metadata=False, extract_annotations=False):
-    container = Container(pathtoebook, output_dir, book_hash=book_hash, save_legacy_bookmark_data=extract_annotations)
+    container = Container(pathtoebook, output_dir, book_hash=book_hash, save_bookmark_data=extract_annotations)
     if serialize_metadata:
         from calibre.ebooks.metadata.meta import get_metadata
         from calibre.utils.serialize import json_dumps
@@ -573,8 +598,8 @@ def render(pathtoebook, output_dir, book_hash=None, serialize_metadata=False, ex
                 f.write(json_dumps(d))
     if extract_annotations:
         annotations = None
-        if container.legacy_bookmark_data:
+        if container.bookmark_data:
-            annotations = json_dumps(tuple(get_legacy_annotations(container)))
+            annotations = json_dumps(tuple(get_stored_annotations(container)))
         if annotations:
             with lopen(os.path.join(output_dir, 'calibre-book-annotations.json'), 'wb') as f:
                 f.write(annotations)